GA4GH Schemas
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  • Introduction
  • API Overview
  • Installing the GA4GH Schemas
  • Schemas
  • Development
  • Changelog
  • Appendix
    • Glossary
    • Use of Ontologies in GA4GH API
    • The JSON Format
    • Google Protocol Buffers
    • Code samples (stub)
    • Generating API Definitions
GA4GH Schemas
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AppendixΒΆ

  • Glossary
    • Short Reads and BAM
    • Genetic variants and VCF
  • Use of Ontologies in GA4GH API
    • Examples for OntologyTerm use
      • Why should we use an ontology term?
      • Ontology Lookup Service
      • What is the minimum attribute requirement for OntologyTerm in GA4GH?
      • Ontology Selection and Overlap
    • Examples
      • Genotypic sex
      • Sequence Ontology
      • Human Phenotype ontology
      • Body part (Uberon)
      • Human disease ontology
      • Experimental factor ontology
      • Unit Ontology
  • The JSON Format
    • GA4GH JSON Serialization
    • Serialization example
  • Google Protocol Buffers
    • What does the GA4GH web API take from Protocol Buffers?
    • How does the GA4GH web API use Protocol Buffer schemas?
    • How does the GA4GH Web API use Protocol Buffers?
  • Code samples (stub)
  • Generating API Definitions
    • Installing Prerequisites
    • Compiling Swagger Documentation
    • Using Generated Definitions
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© Copyright 2015, Global Alliance for Genomics and Health. Revision 30ec8db9.

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